ENCODE Toolkit
20 MCP tools + 48 skills for ENCODE Project genomics — search, download, pipelines
Servidor MCP · de ammawla
Resumo
ENCODE Toolkit é um servidor MCP publicado por ammawla. Marketplaces que lemos e que o listam: 2 (Official MCP Registry, Community GitHub marketplaces). Vimos pela primeira vez em 2026-10-11 e não registramos mudanças desde então. Conforme nossa passagem pelos marketplaces em 2026-10-13.
O que pede
- Roda na sua máquina
Nenhum dos marketplaces que lemos publica as ferramentas ou as configurações que ele pede.
O que declara, pede e executa, por completo
Instale apenas plugins de desenvolvedores em quem você confia. Mostramos o que os marketplaces publicam e não testamos plugins.
Pacote
npm encode-toolkit (encode-toolkit no npm)
- Downloads do npm por semana: 67 (2026-10-13)
- Downloads do npm por mês: 838 (2026-10-13)
- Última versão no npm: 0.3.4, publicada em 2026-09-21
- A versão declarada 0.3.0-beta.5 não consta no npm
Os dados do npm vêm do registro público do npm (registry.npmjs.org, api.npmjs.org). Cada número é do próprio registro e nunca é somado a outro. Um registro que não publica um número não mostra nenhum: sem número não é zero.
Funciona com
- Claude Code
- Codex
- Cursor
- VS Code
- Copilot CLI
Um link de um clique abre o cliente, que pede confirmação antes de adicionar o servidor.
Pelos marketplaces que o listam e pelo transporte MCP que declara, conforme cada cliente documenta. Não testamos plugins.
Conectar
Comandos e configurações gerados apenas a partir do que os marketplaces declaram. Não os executamos por você e não testamos plugins.
Como servidor MCP local: pacote npm
Gerado a partir do que Official MCP Registry declara.
claude mcp add --transport stdio encode-toolkit -- npx -y encode-toolkit[mcp_servers.encode-toolkit]
command = "npx"
args = ["-y", "encode-toolkit"]{
"mcpServers": {
"encode-toolkit": {
"command": "npx",
"args": [
"-y",
"encode-toolkit"
]
}
}
}Como plugin do Claude Code
Gerado a partir do que Community GitHub marketplaces declara.
/plugin marketplace add ammawla/encode-toolkit
/plugin install encode-toolkit@ammawlaOnde está publicado
| Marketplace | Status | Versão | Números | Verificado | Visto pela primeira vez |
|---|---|---|---|---|---|
| Official MCP Registry (Abrir o registro) | Listado | 0.3.0-beta.5 | Downloads por mês (npm): 838 Downloads por semana (npm): 67 Forks (GitHub): 5 Estrelas (GitHub): 21 |
Sem marcação |
Cada número é do próprio marketplace e nunca é somado entre marketplaces. Um marketplace que não publica números não mostra nenhum: sem número não é zero.
Também listado em um marketplace da comunidade
| Marketplace | Repositório | Estrelas (GitHub) |
|---|---|---|
| ammawla | ammawla/encode-toolkit | 21 |
O que o pacote contém
Conforme publicado em Community GitHub marketplaces.
Servidores MCP: 1
encode-toolkit
Skills: 47
accessibility-aggregationbatch-analysisbioinformatics-installercellxgene-contextcite-encodeclinvar-annotationcompare-biosamplescross-referencedata-provenancedisease-researchdownload-encodeensembl-annotation
Mostrar mais 35
epigenome-profilingfunctional-screen-analysisgeo-connectorgnomad-variantsgtex-expressiongwas-cataloghic-aggregationhistone-aggregationintegrative-analysisjaspar-motifsliftover-coordinatesmethylation-aggregationmotif-analysismulti-omics-integrationpeak-annotationpipeline-atacseqpipeline-chipseqpipeline-cutandrunpipeline-dnaseseqpipeline-guidepipeline-hicpipeline-rnaseqpipeline-wgbspublication-trustquality-assessmentregulatory-elementsscientific-writingscrna-meta-analysissearch-encodesetupsingle-cell-encodetrack-experimentsucsc-browservariant-annotationvisualization-workflow
Comandos: 10
browse-filescite-encodecompare-experimentscross-referencedownload-encodelog-provenancemanage-credentialsquality-checksearch-encodetrack-experiments
Agentes: 7
atacseq-pipelinechipseq-pipelinecutandrun-pipelinednaseseq-pipelinehic-pipelinernaseq-pipelinewgbs-pipeline
O que mudou
- Apareceu em um novo marketplace: Community GitHub marketplaces
- Community GitHub marketplaces: apareceu
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Encontrados pelo significado, não por código ou repositório em comum: plugins semelhantes continuam sendo produtos distintos, e isto não é uma avaliação nem uma recomendação.
Este plugin é seu?
Adicione-o aos seus projetos e prove que o mantém com um arquivo no repositório, um arquivo no seu domínio ou um registro DNS. Você recebe alertas quando um marketplace o publica, o remove, muda a marca de verificado ou o que ele pede, e o endpoint remoto passa a ser monitorado como um serviço web.
Dados de Official MCP Registry. Dados de Community GitHub marketplaces. Os números vêm das nossas próprias passagens regulares pelos marketplaces, última leitura em . Não publicamos dados de contato dos editores de plugins.