Paper Search vs Biodiscovery Skills
Biodiscovery Skills is no longer listed on any marketplace we read: these are its last known data, as of 2026‑10‑27.
Paper Search is an MCP server published by openags. Marketplaces we read that list it: 1 (Docker MCP Catalog). Biodiscovery Skills is a plugin bundle for AI coding tools published by dekan-aleksandr. No marketplace we read lists it any more. As of our marketplace pass on 2026-10-28. A plugin in this pair is no longer listed on any marketplace we read, so search engines are asked not to index the page.
Where each is published
| Marketplace |  Paper Search | |
|---|---|---|
| Docker MCP Catalog | Listed Version: sha256:19d0af269a55 Forks (GitHub): 304 Pulls (Docker Hub): 46 052 Stars (Docker Hub): 5 Stars (GitHub): 2 931 Not marked · First seen |
Not listed |
| Community marketplace dekan-aleksandr/biodiscovery-skills | Not listed | Removed on 2026-10-27 Version: 1.0.0 Forks (GitHub): 2 Stars (GitHub): 11 Not marked · First seen |
Each figure is the marketplace's own and is never added up across marketplaces. A marketplace that publishes no figure shows none: no number is not zero.
The facts side by side
| Fact | Paper Search | Biodiscovery Skillsno longer listed · |
|---|---|---|
| Marketplaces that list it (differs) | 1 | 0 |
| Stars (GitHub) (differs) | 2 931 | 11 |
| Pulls (Docker Hub) (differs) | 46 052 | No figure on Docker Hub |
| Forks (GitHub) (differs) | 304 | 2 |
| Last release | Not published | Not published |
| Where it runs (differs) | On your machine (mcp/paper-search) | Installs as a plugin bundle |
| Transport (differs) | stdio | Not stated |
| Tools it declares (differs) | 57 | Not published |
| Environment variables it asks for | Not published | Not published |
| Parts of the bundle (differs) | Not a bundle | 2 |
| Licence | MIT | MIT |
| Repository (differs) | github.com/openags/paper-search-mcp | github.com/dekan-aleksandr/biodiscovery-skills |
| Changes in the last 7 days (differs) | 0 | 2 |
| First seen (differs) | 2026-10-11 | 2026-10-15 |
Lines where the two differ have a tinted background and bold values. No value is marked better or worse: a plugin no marketplace lists any more is shown with its last known data, which we do not rank against current figures.
What to use instead of Biodiscovery Skills
Plugins still listed whose own names, descriptions, tools and skills are closest in meaning to it. Comparable, not endorsed.
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Connect to preclinical research tools and databases (literature search, genomics analysis, target prioritization) to accelerate early-stage life sciences R&D
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Connect AI clients to biomedical data and tools.
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General life-sciences research workflows with query routing, evidence synthesis, and optional parallel subagent analysis across genetics, omics, biology, chemistry, structure…
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197 ready-to-use life sciences skills that turn Claude into a domain expert for genomics, proteomics, drug discovery, biostatistics, scientific computing, and scientific writing…
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tooluniverse io.github.mims-harvard/tooluniverse
2,700+ scientific tools for AI scientists: life science, research, literature, and more.
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Corollary — scientific AI models, tools and databases
Find open biology and chemistry AI models, bioinformatics tools and databases, and run them online.
What each says it does
Paper Search
MCP, CLI, Skills for searching and downloading academic papers from multiple sources like arXiv, PubMed, bioRxiv, etc.
Biodiscovery Skills
Thinking tools for AI agents making discoveries in the life sciences
How to run each
Paper Search As a local MCP server: Docker image
claude mcp add --transport stdio paper-search -- docker run -i --rm mcp/paper-searchBiodiscovery Skills
No data for an automatic command: what its marketplaces declare does not say unambiguously how to connect it.
Commands built only from what the marketplaces declare; the full set for every client is on each card.
Tools each declares
The marketplaces of Biodiscovery Skills publish no list of tools, so we do not compare tools.
Settings each asks for
Neither one's marketplaces publish the settings it asks for.
What it can do: Paper Search · What it can do: Biodiscovery Skills · Compare two other plugins
Data comes from the Docker MCP Catalog (desktop.docker.com/mcp/catalog) and Docker Hub. Data comes from public marketplace files in GitHub repositories of their authors. Figures come from our own regular passes over the marketplaces, last read on . We publish no contact details for plugin publishers.