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research-co-pilot vs io.github.mims-harvard/tooluniverse

research-co-pilot is a plugin bundle for AI coding tools published by Marazii. Marketplaces we read that list it: 1 (Claude Code: claude-plugins-community). io.github.mims-harvard/tooluniverse is an MCP server published by mims-harvard. Marketplaces we read that list it: 2 (Official MCP Registry, Community GitHub marketplaces). As of our marketplace pass on 2026-10-22. This pair was picked by a reader, not by our comparison rule, so search engines are asked not to index the page.

Where each is published

Where each is published
Marketplaceresearch-co-pilotio.github.mims-harvard/tooluniverse
Claude Code: claude-plugins-community Listed
Version: 0.10.0
Forks (GitHub): 3
Stars (GitHub): 13
Not marked · First seen
Not listed
Official MCP Registry Not listed Listed
Version: 1.5.7
Downloads/month (PyPI): 40 535
Downloads/week (PyPI): 13 492
Forks (GitHub): 267
Stars (GitHub): 1 754
Not marked · First seen

Each figure is the marketplace's own and is never added up across marketplaces. A marketplace that publishes no figure shows none: no number is not zero.

The facts side by side

research-co-pilot vs io.github.mims-harvard/tooluniverse
Factresearch-co-pilotio.github.mims-harvard/tooluniverse
Marketplaces that list it (differs)1 (worse)2 (better)
Stars (GitHub) (differs)13 (worse)1 754 (better)
Forks (GitHub) (differs)3 (worse)267 (better)
Last release (differs)Not published2026-10-13
Where it runs (differs)Installs as a plugin bundleOn your machine (tooluniverse)
Transport (differs)Not statedstdio
Tools it declaresNot publishedNot published
Environment variables it asks for (differs)Not published17, secrets among them: 16
Hooks it runs (differs)Not published2
Parts of the bundle (differs)34174
Licence (differs)MITApache-2.0
Repository (differs)github.com/marazii/research-co-pilotgithub.com/mims-harvard/tooluniverse
Changes in the last 7 days (differs)02
First seen2026-10-112026-10-11

Lines where the two differ have a tinted background and bold values. Where the data itself says which value is better (more marketplaces, a larger figure of the same marketplace, a fresher release, a verified mark on a marketplace that lists both), the better one is also marked green with ▲ and the worse one red with ▼. Where it runs, the transport, the tools, the settings, hooks, the bundle's parts, the licence and the week's changes are marked only as different: more or fewer is not better in itself.

What each says it does

research-co-pilot

In its own words, on Claude Code: claude-plugins-community:

About Comprehensive research co-pilot for Claude Code and claude.ai — 13 skills covering literature review, methodology, ethics review, data analysis, qualitative coding, brainstorming, manuscript drafting, replication design, grant writing, talk building, citations, survey design, and peer review. A peer collaborator, not a subservient assistant.

io.github.mims-harvard/tooluniverse

In its own words, on Official MCP Registry:

2,700+ scientific tools for AI scientists: life science, research, literature, and more.

How to run each

research-co-pilot As a Claude Code plugin

Claude Code
/plugin marketplace add anthropics/claude-plugins-community
/plugin install research-co-pilot@claude-community

io.github.mims-harvard/tooluniverse As a local MCP server: PyPI package

Claude Code
claude mcp add --env "ANTHROPIC_API_KEY=<YOUR_ANTHROPIC_API_KEY>" --env "AZURE_OPENAI_API_KEY=<YOUR_AZURE_OPENAI_API_KEY>" --env "BIOGRID_API_KEY=<YOUR_BIOGRID_API_KEY>" --env "BRENDA_PASSWORD=<YOUR_BRENDA_PASSWORD>" --env "DISGENET_API_KEY=<YOUR_DISGENET_API_KEY>" --env "GEMINI_API_KEY=<YOUR_GEMINI_API_KEY>" --env "HF_TOKEN=<YOUR_HF_TOKEN>" --env "NCBI_API_KEY=<YOUR_NCBI_API_KEY>" --env "NVIDIA_API_KEY=<YOUR_NVIDIA_API_KEY>" --env "OMIM_API_KEY=<YOUR_OMIM_API_KEY>" --env "ONCOKB_API_TOKEN=<YOUR_ONCOKB_API_TOKEN>" --env "OPENAI_API_KEY=<YOUR_OPENAI_API_KEY>" --env "OPENROUTER_API_KEY=<YOUR_OPENROUTER_API_KEY>" --env "SEMANTIC_SCHOLAR_API_KEY=<YOUR_SEMANTIC_SCHOLAR_API_KEY>" --env "UMLS_API_KEY=<YOUR_UMLS_API_KEY>" --env "USPTO_API_KEY=<YOUR_USPTO_API_KEY>" --transport stdio tooluniverse -- uvx tooluniverse tooluniverse-smcp-stdio --compact-mode

Requires: ANTHROPIC_API_KEY (secret), AZURE_OPENAI_API_KEY (secret), BIOGRID_API_KEY (secret), BRENDA_PASSWORD (secret), DISGENET_API_KEY (secret), GEMINI_API_KEY (secret), HF_TOKEN (secret), NCBI_API_KEY (secret), NVIDIA_API_KEY (secret), OMIM_API_KEY (secret), ONCOKB_API_TOKEN (secret), OPENAI_API_KEY (secret), OPENROUTER_API_KEY (secret), SEMANTIC_SCHOLAR_API_KEY (secret), UMLS_API_KEY (secret), USPTO_API_KEY (secret)

Commands built only from what the marketplaces declare; the full set for every client is on each card.

Tools each declares

Neither one's marketplaces publish a list of tools, so there is nothing to compare.

Settings each asks for

The marketplaces of research-co-pilot publish no settings it asks for, so we do not compare settings.

What it can do: research-co-pilot · What it can do: io.github.mims-harvard/tooluniverse · Compare two other plugins

Data comes from the public marketplace file https://github.com/anthropics/claude-plugins-community/blob/HEAD/.claude-plugin/marketplace.json. Data comes from the Official MCP Registry (registry.modelcontextprotocol.io), CC0 1.0. Data comes from public marketplace files in GitHub repositories of their authors. Figures come from our own regular passes over the marketplaces, last read on . We publish no contact details for plugin publishers.

Where the data comes from: how the catalog is built