phd-skills
Research skills for paper auditing, citation checks, and experiment analysis.
Plugin bundle · by fcakyon
About
phd-skills is a plugin bundle for AI coding tools published by fcakyon. Marketplaces we read that list it: 1 (Community GitHub marketplaces). The last change we recorded was on 2026-10-23. As of our marketplace pass on 2026-10-23.
What it asks for
- Installs as a plugin bundle
- Hooks: 12
What it declares, asks for and runs, in full
Only install plugins from developers you trust. We list what marketplaces publish and do not test plugins.
Works with
- Claude Code
From the marketplaces that list it and the MCP transport it declares, as each client documents them. We do not test plugins.
Connect
Commands and configs built only from what its marketplaces declare. We do not run them for you and do not test plugins.
As a Claude Code plugin
Built from what Community GitHub marketplaces declares.
/plugin marketplace add fcakyon/claude-codex-settings
/plugin install phd-skills@claude-settings
Where it is published
| Marketplace | Status | Version | Figures | Verified | First seen |
|---|---|---|---|---|---|
| Community marketplace fcakyon/claude-codex-settings (Open the source on GitHub) | Listed | 1.4.0 | Forks (GitHub): 37 Stars (GitHub): 433 |
Not marked | |
| Community marketplace fcakyon/phd-skills (Open the source on GitHub) | Listed | 1.4.0 | Forks (GitHub): 37 Stars (GitHub): 433 |
Not marked |
Each figure is the marketplace's own and is never added up across marketplaces. A marketplace that publishes no figure shows none: no number is not zero.
Listed in 2 community marketplaces
| Marketplace | Repository | Stars (GitHub) |
|---|---|---|
| claude-settings | fcakyon/claude-codex-settings | 1 188 |
| phd-skills | fcakyon/phd-skills | 433 |
How its figures have moved
- 2026-10-20425
- 2026-10-21426
- 2026-10-22429
- 2026-10-23433
Each dot is a day we read a different number; flat stretches are days the number did not move. Figures of different marketplaces are never added up.
What the bundle contains
As published on Community GitHub marketplaces.
Skills: 12
comparedataset-curationdebugexperiment-designlatex-setuplaunchliterature-researchpaper-verificationpaper-writingreproduceresearch-publishingreviewer-defense
Commands: 6
factcheckfortifygapshelpsetupxray
Agents: 2
experiment-analyzerpaper-auditor
Hooks: 5
NotificationPostToolUsePreCompactPreToolUseStop
What changed
- Became a product we track
- Community GitHub marketplaces: appeared
- Community GitHub marketplaces: appeared
Similar plugins
Products whose own names, descriptions, tools and skills are closest in meaning to this one, on every marketplace we read. Closeness is ranked within this list only.
-
5 skills + 35 modes + Material Passport pipeline. Includes v3.6.7 cross-model audit gate and v3.6.8 generator-evaluator contract.
-
5 skills + 35 modes + Material Passport pipeline. Includes v3.6.7 cross-model audit gate and v3.6.8 generator-evaluator contract.
-
Social Science Research gives you the tools and workflows to assist with your research. Ideate on topics, perform literature reviews, analyze data, and have agents peer review…
-
Checks every LaTeX reference against Crossref, dblp, arXiv, DataCite, PubMed and OpenAlex. No LLM.
-
Verifies AI-written references; finds real papers, evidence, datasets and research tools; PRISMA.
-
Academic research toolkit — literature survey, paper reviewing, citation management, and more.
-
Autonomous research workflow agent for AI and scientific research. Guides the full research lifecycle — brainstorming, literature review, experiment design, analysis, and writing.
-
Semi-automated research assistant with skills for literature review, experiments, analysis, writing, and project knowledge management
-
End-to-end research orchestrator from hypothesis to publication.
-
About Comprehensive research co-pilot for Claude Code and claude.ai — 13 skills covering literature review, methodology, ethics review, data analysis, qualitative coding…
Similar plugins by marketplace
The same question asked of one marketplace at a time: is there an analog of this plugin there?
Has a listing on Claude Code: claude-plugins-community (5)
-
About Comprehensive research co-pilot for Claude Code and claude.ai — 13 skills covering literature review, methodology, ethics review, data analysis, qualitative coding…
-
Scientific content analysis for academic research. Supports the full workflow from research question to publication-ready output: codebook development, qualitative and…
-
Automated academic paper review system for Claude Code. Integrates PDF parsing (marker-pdf + PyMuPDF), reference verification (CrossRef + DBLP + Semantic Scholar), SOTA…
-
A powerful AI skill for learning research paper
-
Deep Review is a Claude Code plugin for rigorous review of papers and technical artifacts. Aiming to reduce "edit volume" for researchers and paper-reviewers, it adds a skill that…
Has a listing on Claude Code: claude-plugins-official (5)
-
You.com agent skills for web search, research with citations, and content extraction. Guided integrations for Vercel AI SDK, Claude Agent SDK, OpenAI Agents SDK, crewAI…
-
Create new skills, improve existing skills, and measure skill performance. Use when users want to create a skill from scratch, update or optimize an existing skill, run evals to…
-
Web scraping and crawling powered by Firecrawl. Turn any website into clean, LLM-ready markdown or structured data. Scrape single pages, crawl entire sites, search the web, and…
-
Exa AI web search, deep research, and content extraction. Provides MCP tools and research skills for comprehensive web search, people discovery, company research, academic papers…
-
DataHub development and interaction toolkit with connector planning, PR review, catalog search, metadata enrichment, lineage tracing, data quality management, and connection setup…
Has a listing on Claude: knowledge-work-plugins (5)
-
Connect to preclinical research tools and databases (literature search, genomics analysis, target prioritization) to accelerate early-stage life sciences R&D
-
Exa AI web search, deep research, and content extraction. Provides MCP tools and research skills for comprehensive web search, people discovery, company research, academic papers…
-
Write SQL, explore datasets, and generate insights faster. Build visualizations and dashboards, and turn raw data into clear stories for stakeholders.
-
Sanity content platform integration with MCP server, agent skills, and slash commands. Query and author content, build and optimize GROQ queries, design schemas, and set up Visual…
-
DataRobot skills for AI/ML workflows — model training, deployment, predictions, feature engineering, monitoring, explainability, data preparation, App Framework CI/CD, and…
Has a listing on Codex: openai-curated (openai/plugins) (5)
-
Work with Zotero from Codex: search your library, export BibTeX, insert citations, and import references through the Zotero desktop app.
-
Consensus is the go-to MCP for academic research. Connect directly to 220M+ peer-reviewed papers to search, synthesize, and build structured research outputs from within your…
-
Evaluate Codex skills and plugins from chat with a beginner-friendly start command, local-first reports, token budget explanations, and guided benchmarking.
-
General life-sciences research workflows with query routing, evidence synthesis, and optional parallel subagent analysis across genetics, omics, biology, chemistry, structure…
-
Answer product and business questions with data
Has a listing on Community GitHub marketplaces (5)
-
5 skills + 35 modes + Material Passport pipeline. Includes v3.6.7 cross-model audit gate and v3.6.8 generator-evaluator contract.
-
5 skills + 35 modes + Material Passport pipeline. Includes v3.6.7 cross-model audit gate and v3.6.8 generator-evaluator contract.
-
Social Science Research gives you the tools and workflows to assist with your research. Ideate on topics, perform literature reviews, analyze data, and have agents peer review…
-
Checks every LaTeX reference against Crossref, dblp, arXiv, DataCite, PubMed and OpenAlex. No LLM.
-
Academic research toolkit — literature survey, paper reviewing, citation management, and more.
Has a listing on Copilot CLI: github/awesome-copilot (5)
-
A runtime-portable 5-agent quality gate that adjudicates text artifacts before they ship. Five role-conditioned LLM deliberators run a 2-round async protocol with cross-read…
-
Three-layer verification pipeline for AI output. Extracts claims, finds sources, and flags hallucination risks so humans can verify before acting.
-
Turn your Copilot sessions into proof of impact — research-grounded HTML reports with effort estimation, skills analysis, and ROI metrics from local session logs.
-
Design, build, review, and publish GitHub Skills-style exercises with one coordinating agent and five Agent Skills for learner journeys, workflow-backed validation, and release…
-
Goal-driven task orchestration with independent verification. Interviews the user to define a clear goal, then loops between a Builder subagent (does the work) and an Inspector…
Has a listing on Copilot CLI: github/copilot-plugins (5)
-
Toolkit for building Microsoft 365 Copilot declarative agents — scaffolding, JSON manifest development, and capability configuration.
-
workiq-productivity
WorkIQ productivity skills powered by the local WorkIQ CLI — read-only insights across email, meetings, calendar, Teams, SharePoint, projects, and people.
-
Advanced Security plugin for GitHub Copilot.
-
workiq
Query Microsoft 365 data with natural language — emails, meetings, documents, Teams messages, and more.
-
Bring Azure DevOps work-item, repository, and pull-request workflows into GitHub Copilot.
Has a listing on Cursor: cursor/plugins (5)
-
Consult a stronger model before major decisions, when stuck, and before declaring done.
-
Generate presentations, documents, and webpages.
-
Skill mapping, practice plans, and learning retrospectives.
-
Track AI visibility, sentiment, and citations.
-
Iterative self-referential AI loops using the Ralph Wiggum technique.
Has a listing on Docker MCP Catalog (5)
-
MCP, CLI, Skills for searching and downloading academic papers from multiple sources like arXiv, PubMed, bioRxiv, etc.
-
The ArXiv MCP Server provides a comprehensive bridge between AI assistants and arXiv's research repository through the Model Context Protocol (MCP). Features: • Search arXiv…
-
Real-time web search, reasoning, and research through Perplexity's API
-
Tools for interacting with Hugging Face models, datasets, research papers, and more.
-
Exa AI web search, deep research, and content extraction. Provides MCP tools and research skills for comprehensive web search, people discovery, company research, academic papers…
Has a listing on Official MCP Registry (5)
-
Checks every LaTeX reference against Crossref, dblp, arXiv, DataCite, PubMed and OpenAlex. No LLM.
-
Verifies AI-written references; finds real papers, evidence, datasets and research tools; PRISMA.
-
Academic papers, reference verification and research data for AI agents.
-
Simulated peer reviews of your own paper in a venue's form, with an inline review card in chat.
-
Verify academic citations against real databases. Catches hallucinated references, exports BibTeX.
Has a listing on PyPI (MCP servers) (5)
-
arxiv-mcp-server io.github.blazickjp/arxiv-mcp-server
Search arXiv papers, download full text, semantic search, citation graphs, and alerts via MCP.
-
air-blackbox-mcp io.github.airblackbox/air-blackbox-mcp
EU AI Act compliance scanner for Python AI agents. 14 tools across 6 articles.
-
MCP server for AlphaFold and 8 other biomedical data sources with a local SQLite knowledge graph
-
Provider-neutral web_search for AI agents. Grounding + agent search APIs, keyless defaults.
-
Read Bing Webmaster data and change it, directly or through a reviewed plan.
Has a listing on npm registry (MCP servers) (5)
-
Catch AI-fabricated citations (real DOI + fake title). Retraction, open-access, 10,000+ CSL styles.
-
Overleaf MCP server for Claude, Codex, ChatGPT, and Cursor with safe LaTeX editing and review.
-
google-surf-mcp io.github.HarimxChoi/google-surf-mcp
Web, academic and code search with graph RAG, data lineage, ontology and cross-project schema links.
-
Compile documents into a cited knowledge wiki. Retrieve evidence, query, and review via local MCP.
-
scrivener-mcp io.github.writerslogic/scrivener-mcp
MCP server for Scrivener: read, write, analyze, and search your manuscripts with AI assistants.
Found by meaning, not by shared code or a shared repository: similar plugins stay separate products, and this is not a review or a recommendation.
Want this mark on your plugin in our catalog?
Prove you maintain it with a file in its repository, a file on your domain or a DNS record, and you can show this mark on the card, with live banners for your site and README. How verification works
You also get alerts when a marketplace lists it, drops it, changes its verified mark or what it asks for, and its remote endpoint goes on monitoring as a web service.
Data comes from public marketplace files in GitHub repositories of their authors. Figures come from our own regular passes over the marketplaces, last read on . We publish no contact details for plugin publishers.