EMBL AI Librarian
Retrieve ranked Europe PMC evidence passages for biomedical research questions.
Plugin bundle · by Petroni Lab, EMBL
About
EMBL AI Librarian is a plugin bundle for AI coding tools published by Petroni Lab, EMBL. Marketplaces we read that list it: 1 (Community GitHub marketplaces). The last change we recorded was on 2026-11-09. As of our marketplace pass on 2026-11-10.
What it asks for
- Installs as a plugin bundle
None of the marketplaces we read publishes its tools or the settings it asks for.
What it declares, asks for and runs, in full
Only install plugins from developers you trust. We list what marketplaces publish and do not test plugins.
Works with
- Claude Code
From the marketplaces that list it and the MCP transport it declares, as each client documents them. We do not test plugins.
Connect
Commands and configs built only from what its marketplaces declare. We do not run them for you and do not test plugins.
As a Claude Code plugin
Built from what Community GitHub marketplaces declares.
/plugin marketplace add petroni-lab/librarian
/plugin install librarian@librarianWhere it is published
| Marketplace | Status | Version | Figures | Verified | First seen |
|---|---|---|---|---|---|
| Community marketplace petroni-lab/librarian (Open the source on GitHub) | Listed | 1.0.0 | Forks (GitHub): 2 Stars (GitHub): 47 |
Not marked |
Each figure is the marketplace's own and is never added up across marketplaces. A marketplace that publishes no figure shows none: no number is not zero.
Listed in one community marketplace
| Marketplace | Repository | Stars (GitHub) |
|---|---|---|
| librarian | petroni-lab/librarian | 47 |
How its figures have moved
- 2026-11-0645
- 2026-11-0947
Each dot is a day we read a different number; flat stretches are days the number did not move. Figures of different marketplaces are never added up.
What the bundle contains
As published on Community GitHub marketplaces.
Skills: 1
librarian
What changed
- Became a product we track
- Community GitHub marketplaces: appeared
Similar plugins
Products whose own names, descriptions, tools and skills are closest in meaning to this one, on every marketplace we read. Closeness is ranked within this list only.
-
Scientific literature analyzer and clinical search aggregator.
-
Search 11 million biomedical abstracts (PubMed, bioRxiv, medRxiv) by meaning or by exact terms.
-
Forensic-grade PubMed research engine for Claude Code. Search 36M+ biomedical articles with PICO-structured queries, synthesize evidence with GRADE confidence ratings, critically…
-
Noodle Biomedical Literature Discovery MCP
Search biomedical papers, inspect publication records, and traverse citation or semantic graphs.
-
Finds and ranks recent scientific papers that matter most for a research question or project.
-
Build systematic literature databases using OpenAlex API. Phased workflow for search, screening, snowballing, annotation, and synthesis with structured user interaction.
-
europepmc-mcp io.github.mrfentmen/europepmc-mcp
Search Europe PMC life science literature including preprints. No key required.
-
Select & run open-source AI literature-review tools: a curated 70+ catalog plus a launcher (scripts/litrun.py) that installs and runs the top tools and pipelines.
-
BGPT - Scientific Paper Search
Search scientific papers with structured experimental data from full-text studies
-
Search PubMed, read abstracts and summaries, and find similar articles in NCBI PubMed.
Similar plugins by marketplace
The same question asked of one marketplace at a time: is there an analog of this plugin there?
Has a listing on Claude Code: claude-plugins-community (5)
-
Forensic-grade PubMed research engine for Claude Code. Search 36M+ biomedical articles with PICO-structured queries, synthesize evidence with GRADE confidence ratings, critically…
-
A powerful AI skill for learning research paper
-
Scientific content analysis for academic research. Supports the full workflow from research question to publication-ready output: codebook development, qualitative and…
-
Search academic papers via OpenAlex — find papers by keyword, look up details by DOI, with pagination and sorting
-
Deep academic paper analysis with bilingual (English/Chinese) output. Analyzes research papers from PDF paths, pasted text, or arXiv links, producing structured five-section…
Has a listing on Claude Code: claude-plugins-official (5)
-
Exa AI web search, deep research, and content extraction. Provides MCP tools and research skills for comprehensive web search, people discovery, company research, academic papers…
-
You.com agent skills for web search, research with citations, and content extraction. Guided integrations for Vercel AI SDK, Claude Agent SDK, OpenAI Agents SDK, crewAI…
-
Web scraping and crawling powered by Firecrawl. Turn any website into clean, LLM-ready markdown or structured data. Scrape single pages, crawl entire sites, search the web, and…
-
Build AI applications with real-time web data using Tavily's search, extract, crawl, and research APIs.
-
Nimble web data toolkit — search, extract, map, crawl the web and work with structured data agents
Has a listing on Claude: knowledge-work-plugins (5)
-
Connect to preclinical research tools and databases (literature search, genomics analysis, target prioritization) to accelerate early-stage life sciences R&D
-
Exa AI web search, deep research, and content extraction. Provides MCP tools and research skills for comprehensive web search, people discovery, company research, academic papers…
-
Evidence-backed BioPharma research workflows over Maven Bio's drug, trial, company, and deal knowledge graph. Skills for competitive pipelines, indication landscapes, asset…
-
Search across all of your company's tools in one place. Find anything across email, chat, documents, and wikis without switching between apps.
-
Build AI applications with real-time web data using Tavily's search, extract, crawl, and research APIs.
Has a listing on Codex: openai-curated (openai/plugins) (5)
-
General life-sciences research workflows with query routing, evidence synthesis, and optional parallel subagent analysis across genetics, omics, biology, chemistry, structure…
-
Work with Zotero from Codex: search your library, export BibTeX, insert citations, and import references through the Zotero desktop app.
-
Consensus is the go-to MCP for academic research. Connect directly to 220M+ peer-reviewed papers to search, synthesize, and build structured research outputs from within your…
-
Predict structures, screen molecules and proteins, and design binders.
-
Evaluate Codex skills and plugins from chat with a beginner-friendly start command, local-first reports, token budget explanations, and guided benchmarking.
Has a listing on Community GitHub marketplaces (5)
-
Build systematic literature databases using OpenAlex API. Phased workflow for search, screening, snowballing, annotation, and synthesis with structured user interaction.
-
Select & run open-source AI literature-review tools: a curated 70+ catalog plus a launcher (scripts/litrun.py) that installs and runs the top tools and pipelines.
-
Academic research plugin for Claude Code: literature reviews, systematic reviews, peer review and citation checking, with every citation verified against OpenAlex, arXiv and…
-
literature-review
Literature search, systematic reviews, citation management and reference managers.
-
Search CrossRef, OpenAlex, PubMed, Semantic Scholar, and optional Scopus; deduplicate results, download open-access PDFs by DOI, classify papers, monitor new results, and analyze…
Has a listing on Copilot CLI: github/awesome-copilot (5)
-
Three-layer verification pipeline for AI output. Extracts claims, finds sources, and flags hallucination risks so humans can verify before acting.
-
Multi-model council for Copilot CLI: three subagents on different model families (Anthropic, OpenAI, Google) answer independently, then build on each other or attack the leading…
-
Makes clear, honest charts that state their point, and critiques charts you share. Checks labels, axes, and colors on the rendered chart before you see it.
-
Task Researcher and Task Planner for intermediate to expert users and large codebases - Brought to you by microsoft/edge-ai
-
Safe BLE diagnostics, evidence workflows, and guarded automation for AI agents.
Has a listing on Copilot CLI: github/copilot-plugins (5)
-
workiq
Query Microsoft 365 data with natural language — emails, meetings, documents, Teams messages, and more.
-
Toolkit for building Microsoft 365 Copilot declarative agents — scaffolding, JSON manifest development, and capability configuration.
-
workiq-productivity
WorkIQ productivity skills powered by the local WorkIQ CLI — read-only insights across email, meetings, calendar, Teams, SharePoint, projects, and people.
-
Advanced Security plugin for GitHub Copilot.
-
Build Power Apps Canvas Apps using the Canvas Authoring MCP server.
Has a listing on Cursor: cursor/plugins (5)
Has a listing on Docker MCP Catalog (5)
-
MCP, CLI, Skills for searching and downloading academic papers from multiple sources like arXiv, PubMed, bioRxiv, etc.
-
The ArXiv MCP Server provides a comprehensive bridge between AI assistants and arXiv's research repository through the Model Context Protocol (MCP). Features: • Search arXiv…
-
Exa AI web search, deep research, and content extraction. Provides MCP tools and research skills for comprehensive web search, people discovery, company research, academic papers…
-
Real-time web search, reasoning, and research through Perplexity's API
-
Production-ready RAG service to search and retrieve data from your documents.
Has a listing on Official MCP Registry (5)
-
Scientific literature analyzer and clinical search aggregator.
-
Search 11 million biomedical abstracts (PubMed, bioRxiv, medRxiv) by meaning or by exact terms.
-
Noodle Biomedical Literature Discovery MCP
Search biomedical papers, inspect publication records, and traverse citation or semantic graphs.
-
Finds and ranks recent scientific papers that matter most for a research question or project.
-
europepmc-mcp io.github.mrfentmen/europepmc-mcp
Search Europe PMC life science literature including preprints. No key required.
Has a listing on PyPI (MCP servers) (5)
-
Multi-source biomedical literature search: PubMed, Europe PMC, OpenAlex, full text, citations
-
An MCP server that provides access to the DBLP computer science bibliography for LLMs.
-
MCP server for the Semantic Scholar API: search 200M+ papers, citations, authors, recommendations.
-
MCP, CLI, Skills for searching and downloading academic papers from multiple sources like arXiv, PubMed, bioRxiv, etc.
-
arxiv-mcp-server io.github.blazickjp/arxiv-mcp-server
Search arXiv papers, download full text, semantic search, citation graphs, and alerts via MCP.
Has a listing on npm registry (MCP servers) (5)
-
Use when the user needs academic paper retrieval — searching scientific literature and patent/author/source metadata, finding paper chunks for RAG-style citations, or expanding…
-
A Node.js MCP server for searching and downloading academic papers from multiple sources, including arXiv, PubMed, bioRxiv, Web of Science, and more.
-
pubcrawl io.github.nickjlamb/pubcrawl
PubMed & Europe PMC literature search, US/UK drug labelling, and clinical trials for AI assistants.
-
Find books, papers and dissertations with Anna's Archive and OpenAlex, then download or read them.
-
Zotero MCP server for Claude and ChatGPT: search, citations, safe writes, PDF passages and pages.
Found by meaning, not by shared code or a shared repository: similar plugins stay separate products, and this is not a review or a recommendation.
Want this mark on your plugin in our catalog?
Prove you maintain it with a file in its repository, a file on your domain or a DNS record, and you can show this mark on the card, with live banners for your site and README. How verification works
You also get alerts when a marketplace lists it, drops it, changes its verified mark or what it asks for, and its remote endpoint goes on monitoring as a web service.
Data comes from public marketplace files in GitHub repositories of their authors. Figures come from our own regular passes over the marketplaces, last read on . We publish no contact details for plugin publishers.