io.github.cyanheads/gnomad-genetics-mcp-server
Ancestry allele frequencies, LoF constraint, variant lists, and coverage from gnomAD, with ClinVar.
MCP server · by cyanheads
About
io.github.cyanheads/gnomad-genetics-mcp-server is an MCP server published by cyanheads. Marketplaces we read that list it: 1 (Official MCP Registry). The last change we recorded was on 2026-10-14. As of our marketplace pass on 2026-10-14.
What it asks for
- Runs remotely
- Settings: 6
What it declares, asks for and runs, in full
Only install plugins from developers you trust. We list what marketplaces publish and do not test plugins.
Package
npm @cyanheads/gnomad-genetics-mcp-server (@cyanheads/gnomad-genetics-mcp-server on npm)
- npm downloads/week: 87 (2026-10-12)
- npm downloads/month: 895 (2026-10-12)
- Latest version on npm: 0.4.0, published 2026-09-30
- Declared version 0.4.1 is not listed on npm
npm facts come from the public npm registry (registry.npmjs.org, api.npmjs.org). Each figure is the registry's own and is never added to another. A registry that publishes no figure shows none: no number is not zero.
Works with
- Claude Code
- Codex
- Cursor
- VS Code
- Copilot CLI
A one-click link opens the client, which asks you to confirm before it adds the server.
From the marketplaces that list it and the MCP transport it declares, as each client documents them. We do not test plugins.
Connect
Commands and configs built only from what its marketplaces declare. We do not run them for you and do not test plugins.
As a remote MCP server
Built from what Official MCP Registry declares.
claude mcp add --transport http gnomad-genetics-mcp-server https://gnomad-genetics.caseyjhand.com/mcp
[mcp_servers.gnomad-genetics-mcp-server]
url = "https://gnomad-genetics.caseyjhand.com/mcp"
{
"mcpServers": {
"gnomad-genetics-mcp-server": {
"url": "https://gnomad-genetics.caseyjhand.com/mcp"
}
}
}
Where it is published
| Marketplace | Status | Version | Figures | Verified | First seen |
|---|---|---|---|---|---|
| Official MCP Registry (Open the registry record) | Listed | 0.4.1 | Downloads/month (npm): 895 Downloads/week (npm): 87 Forks (GitHub): 0 Stars (GitHub): 1 |
Not marked |
Each figure is the marketplace's own and is never added up across marketplaces. A marketplace that publishes no figure shows none: no number is not zero.
What changed
- Official MCP Registry: description changed
- Official MCP Registry: environment variables changed (now 6): added MCP_TRANSPORT_TYPE
- Official MCP Registry: released version 0.4.1 (was 0.4.0)
- Official MCP Registry: launch arguments changed: removed <>
Similar plugins
Products whose own names, descriptions, tools and skills are closest in meaning to this one, on every marketplace we read. Closeness is ranked within this list only.
-
GWAS Bioinformatics MCP Server
Access 30+ bioinformatics tools from 14 databases.
-
genefoundry io.github.berntpopp/genefoundry
MCP gateway federating 22 biomedical MCP servers behind one endpoint: gnomAD, ClinVar, HPO, VEP.
-
sniff-mcp world.sniff/sniff-mcp
Canine genomics for agents: breed allele frequencies, AI pathogenicity + OMIA clinical disease layer
-
Bounded genomic data from archives and indexed files, with versioned reference evidence.
-
clinvar-mcp io.github.mrfentmen/clinvar-mcp
Clinical variants from ClinVar. No key required.
-
Folklore Clinical Variant Interpretation MCP
Bioinformatics MCP for genomic variant interpretation, gene-disease evidence and literature.
-
mcp com.gencove.consumer/mcp
Gencove consumer genomics: profile, kit status, ancestry, PRS, raw data. Requires Gencove auth.
-
50+ biomedical data sources in one MCP server — PubMed, ClinVar, gnomAD, KEGG, and more
-
wt io.github.HumanLineage/wt
Human Lineage MCP server — search and query the public genealogical graph of all humanity
-
ensembl-mcp io.github.mrfentmen/ensembl-mcp
Genome lookup from Ensembl. No key required.
Similar plugins by marketplace
The same question asked of one marketplace at a time: is there an analog of this plugin there?
Has a listing on Claude Code: claude-plugins-community (5)
-
197 ready-to-use life sciences skills that turn Claude into a domain expert for genomics, proteomics, drug discovery, biostatistics, scientific computing, and scientific writing…
-
A set of skills that teach Claude how to work with GEDCOM genealogy files. You can search through GEDCOM databases, show individuals' details, and make changes to the database all…
-
Zero-config MCP server for searchable documentation. SQLite or PostgreSQL.
-
agent-discover io.github.keshrath/agent-discover
Find, install and enable MCP servers mid-session on any host, with consent and tool pinning
-
A causal inference plugin for AI agents. Describe a problem in plain language and it helps you choose a method, check assumptions, write the analysis in R or Python, and…
Has a listing on Claude Code: claude-plugins-official (5)
-
Access Confidence feature flags, experiments, and migration tools directly from Claude Code.
-
Dynatrace observability skills: DQL query patterns, application and infrastructure monitoring, log analysis, problem investigation, and incident response workflows, with the…
-
Figma design platform integration. Access design files, extract component information, read design tokens, and translate designs into code. Bridge the gap between design and…
-
Predict structures, screen molecules and proteins, and design binders with Boltz from Claude Code.
-
Hosted MCP server for AI-assisted Grafana Cloud observability — no local installation required.
Has a listing on Claude: knowledge-work-plugins (5)
-
Connect to preclinical research tools and databases (literature search, genomics analysis, target prioritization) to accelerate early-stage life sciences R&D
-
Evidence-backed BioPharma research workflows over Maven Bio's drug, trial, company, and deal knowledge graph. Skills for competitive pipelines, indication landscapes, asset…
-
Figma design platform integration. Access design files, extract component information, read design tokens, and translate designs into code. Bridge the gap between design and…
-
Hosted MCP server for AI-assisted Grafana Cloud observability — no local installation required.
-
A suite of agent skills for the full GrowthBook feature flag and experimentation lifecycle.
Has a listing on Codex: openai-curated (openai/plugins) (5)
-
General life-sciences research workflows with query routing, evidence synthesis, and optional parallel subagent analysis across genetics, omics, biology, chemistry, structure…
-
Guided NGS intake, local execution, and public-pipeline routing for BCL, FASTQ, DNA variant, RNA-seq, single-cell, epigenomics, amplicon, and metagenomics analyses, with deeper…
-
Predict structures, screen molecules and proteins, and design binders.
-
PostHog gives your AI agent direct access to your product analytics, feature flags, experiments, error tracking, surveys, logs, and LLM analytics. Ask questions about your data…
-
Evaluate Codex skills and plugins from chat with a beginner-friendly start command, local-first reports, token budget explanations, and guided benchmarking.
Has a listing on Community GitHub marketplaces (5)
-
FastMCP server for bidirectional sync between personal and team Obsidian vaults
FastMCP server for bidirectional sync between personal and team Obsidian vaults.
-
Access Confidence feature flags, experiments, and migration tools directly from Claude Code.
-
Dynatrace observability skills: DQL query patterns, application and infrastructure monitoring, log analysis, problem investigation, and incident response workflows, with the…
-
Predict structures, screen molecules and proteins, and design binders with Boltz from Claude Code.
-
Dash0 Observability
OpenTelemetry observability for OpenAI Codex sessions. Captures prompts, tool calls, MCP calls, sub-agent activity, and token usage as OTel traces.
Has a listing on Copilot CLI: github/awesome-copilot (5)
-
Safe BLE diagnostics, evidence workflows, and guarded automation for AI agents.
-
Figma design platform integration. Access design files, extract component information, read design tokens, and translate designs into code. Bridge the gap between design and…
-
See your local Copilot token usage by day, model, and session, and get tips to use it more efficiently.
-
Complete toolkit for building Model Context Protocol (MCP) servers in Go using the official github.com/modelcontextprotocol/go-sdk. Includes instructions for best practices, a…
-
Complete toolkit for building Model Context Protocol (MCP) servers in TypeScript/Node.js using the official SDK. Includes instructions for best practices, a prompt for generating…
Has a listing on Copilot CLI: github/copilot-plugins (5)
-
Toolkit for building Microsoft 365 Copilot declarative agents — scaffolding, JSON manifest development, and capability configuration.
-
mcp-apps
Generate MCP App widgets for MCP tools. Produces self-contained HTML widgets using the MCP Apps protocol.
-
Build Power Apps Canvas Apps using the Canvas Authoring MCP server.
-
workiq
Query Microsoft 365 data with natural language — emails, meetings, documents, Teams messages, and more.
-
Advanced Security plugin for GitHub Copilot.
Has a listing on Cursor: cursor/plugins (5)
-
Inspect and manage feature gates, experiments, dynamic configs, and metrics.
-
Work with PostHog from chat: query product analytics and run SQL, manage feature flags and experiments, triage error tracking issues, and review session replays, surveys, and…
-
CLI-backed repo compatibility scans plus agents that audit startup, validation, and docs against reality.
-
Explore datasets and tables and run SQL queries.
-
Skills for building on the Cursor Origin API. Fetch the live spec first, then follow the Origin rules for credentials, scopes, webhooks, paging, and errors. Includes a skill that…
Has a listing on Docker MCP Catalog (5)
-
Generate, run, debug lifescience workflows.
-
The Official Model Context Protocol (MCP) server for Kagi Search & other tools.
-
An MCP server to help make U.S. Government open datasets AI-friendly.
-
Read and score Opik traces, experiments, datasets and prompts from your AI assistant.
-
Give your AI agents trusted access to the full Postman platform.
Has a listing on Official MCP Registry (5)
-
GWAS Bioinformatics MCP Server
Access 30+ bioinformatics tools from 14 databases.
-
genefoundry io.github.berntpopp/genefoundry
MCP gateway federating 22 biomedical MCP servers behind one endpoint: gnomAD, ClinVar, HPO, VEP.
-
sniff-mcp world.sniff/sniff-mcp
Canine genomics for agents: breed allele frequencies, AI pathogenicity + OMIA clinical disease layer
-
Bounded genomic data from archives and indexed files, with versioned reference evidence.
-
clinvar-mcp io.github.mrfentmen/clinvar-mcp
Clinical variants from ClinVar. No key required.
Found by meaning, not by shared code or a shared repository: similar plugins stay separate products, and this is not a review or a recommendation.
Is this your plugin?
Add it to your projects and prove you maintain it with a file in its repository, a file on your domain or a DNS record. You get alerts when a marketplace lists it, drops it, changes its verified mark or what it asks for, and its remote endpoint goes on monitoring as a web service.
Data comes from the Official MCP Registry (registry.modelcontextprotocol.io), CC0 1.0. Figures come from our own regular passes over the marketplaces, last read on . We publish no contact details for plugin publishers.